Pelagibacteraceae bacterium GOM-A1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium GOM-A1 is a member of the Pelagibacteraceae family, notable for its single replicon, indicating a streamlined genome structure. The organism is cataloged under the accession number LHBX00000000.1, which allows for its identification and retrieval of genomic information from biological databases. This bacterium is part of a group known for its significant ecological role in marine environments, particularly in oceanic waters where it contributes to the microbial loop and plays a crucial role in carbon cycling. The streamlined nature of Pelagibacteraceae members often correlates with their adaptation to nutrient-poor conditions, allowing them to thrive in oligotrophic marine ecosystems. The presence of Pelagibacteraceae bacterium GOM-A1 highlights the importance of microbial diversity in oceanic habitats and the potential ecological implications of such organisms in biogeochemical processes. Understanding its genomic traits can provide insights into the evolutionary adaptations that enable survival in specific environmental niches.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagibacteraceae bacterium GOM-A1 A1_S1_73, whole genome shotgun

Gene Summary

Adenine Count

469311 bp

Thymine Count

470578 bp

Guanine Count

195776 bp

Cytosine Count

194386 bp

Genome Length

1330051 bp

Protein-coding Genes

1370 genes

Non-Coding Genes

32 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin reductaseAKH19_07035Not AvailableNegative1296234 - 129717834111.0
nucleoside-diphosphate sugar epimeraseAKH19_07040Not AvailablePositive1297200 - 129814735980.8
hypothetical proteinAKH19_07045Not AvailablePositive1298147 - 129880925596.3
carbamoyl phosphate synthase large subunitAKH19_07050Not AvailableNegative1298812 - 1302036118857.0
carbamoyl-phosphate synthaseAKH19_07055Not AvailableNegative1302014 - 130320744697.1
glutamyl-trna amidotransferaseAKH19_07060Not AvailablePositive1303331 - 130379217438.0
dna primaseAKH19_07065Not AvailablePositive1303792 - 130556769227.1
rna polymerase sigma factor rpodAKH19_07070Not AvailablePositive1305635 - 130746170424.0
Trna-valNot AvailableNot AvailablePositive1307461 - 1307535Not Available
Trna-metNot AvailableNot AvailablePositive1307596 - 1307672Not Available

Displaying genes 1371 – 1380 of 1402 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.