Pelagibacteraceae bacterium GOM-A1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Candidatus Pelagibacterales

Family

Candidatus Pelagibacteraceae

Genus

Description

Pelagibacteraceae bacterium GOM-A1 is a member of the Pelagibacteraceae family, notable for its single replicon, indicating a streamlined genome structure. The organism is cataloged under the accession number LHBX00000000.1, which allows for its identification and retrieval of genomic information from biological databases. This bacterium is part of a group known for its significant ecological role in marine environments, particularly in oceanic waters where it contributes to the microbial loop and plays a crucial role in carbon cycling. The streamlined nature of Pelagibacteraceae members often correlates with their adaptation to nutrient-poor conditions, allowing them to thrive in oligotrophic marine ecosystems. The presence of Pelagibacteraceae bacterium GOM-A1 highlights the importance of microbial diversity in oceanic habitats and the potential ecological implications of such organisms in biogeochemical processes. Understanding its genomic traits can provide insights into the evolutionary adaptations that enable survival in specific environmental niches.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagibacteraceae bacterium GOM-A1 A1_S1_73, whole genome shotgun

Gene Summary

Adenine Count

469311 bp

Thymine Count

470578 bp

Guanine Count

195776 bp

Cytosine Count

194386 bp

Genome Length

1330051 bp

Protein-coding Genes

1370 genes

Non-Coding Genes

32 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase s49AKH19_05875Not AvailablePositive1069126 - 106993230138.3
glycyl-trna synthetase subunit alphaAKH19_05880Not AvailablePositive1069922 - 107080634260.0
glycyl-trna synthetase subunit betaAKH19_05885Not AvailablePositive1070808 - 107287179911.9
pyruvate phosphate dikinaseAKH19_05890Not AvailablePositive1072872 - 107552999056.5
quinolinate phosphoribosyl transferaseAKH19_05895Not AvailableNegative1075539 - 107637531273.6
quinolinate synthetaseAKH19_05900Not AvailableNegative1076381 - 107737036636.3
Trna-leuNot AvailableNot AvailablePositive1077429 - 1077514Not Available
Tmrna,resume consensus sequence (at 184): tataaatgctaacgaaagNot AvailableNot AvailablePositive1077495 - 1077805Not Available
fad-dependent thymidylate synthaseAKH19_05910Not AvailablePositive1077834 - 107878136660.8
hypothetical proteinAKH19_05915Not AvailableNegative1078786 - 107941525101.1

Displaying genes 1151 – 1160 of 1402 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.