Frigoribacterium sp. RIT-PI-h

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Frigoribacterium

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusFrigoribacterium
SpeciesFrigoribacterium sp. RIT-PI-h
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Frigoribacterium sp. RIT-PI-h

Accession NumberLHOZ00000000.1

Gene Summary

Adenine Count

500899 bp

Thymine Count

496140 bp

Guanine Count

1220842 bp

Cytosine Count

1227465 bp

Genome Length

3445346 bp

Protein-coding Genes

2815 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phenazine biosynthesis protein phzfAEQ27_13480Q98KN6+2823975 - 282493432531.7
atp-dependent dna ligaseAEQ27_13490Not Available+2827913 - 282892937443.0
atp-dependent dna ligaseAEQ27_13495L0TDE1-2828992 - 283012540596.1
xylose isomeraseAEQ27_13510Not Available+2834217 - 283502028691.2
oxidoreductaseAEQ27_13515Not Available+2835017 - 283614438856.8
hypothetical proteinAEQ27_13520Not Available-2836344 - 28366169048.68
glycosyl hydrolaseAEQ27_13530Not Available-2837544 - 283884846252.0
aldo/keto reductaseAEQ27_13540Q8CG45-2839756 - 284068532643.9
hypothetical proteinAEQ27_13545Q53194-2840754 - 284158429740.7
abc transporter permeaseAEQ27_13555Not Available-2842458 - 284346836049.8

Displaying genes 2381 – 2390 of 2866 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

196 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0000841L-arabinono-1,4-lactoneC5H8O5Chemical structure of L-arabinono-1,4-lactoneNot available
Average148.114Da
Monoisotopic148.037173358Da

Displaying 1–10 of 196 metabolites