Methylibium sp. NZG

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Methylibium

Description

Methylibium sp. NZG is a Gram-negative bacterium characterized by its bacilli shape and the presence of flagella, which enable motility. This organism has a single replicon, suggesting a streamlined genomic organization. The strain is cataloged under the accession number LGRD00000000.1, indicating its availability for further study and characterization. Being a member of the Methylibium genus, this bacterium is likely involved in methylotrophic metabolism, which allows it to utilize methanol and other one-carbon compounds as carbon sources. Such metabolic capabilities can play a significant role in biogeochemical cycling, particularly in environments rich in organic compounds. The motile nature of Methylibium sp. NZG, facilitated by its flagella, may enhance its ability to navigate through varied environments, potentially leading to interactions with other microbial communities. This adaptability could contribute to its ecological niche, helping to establish its role in nutrient cycling and decomposition processes. In summary, Methylibium sp. NZG demonstrates significant traits, including its Gram-negative classification, bacilli shape, flagella presence, and a single replicon, which collectively highlight its ecological potential in environments where methylotrophic bacteria are crucial for organic matter processing and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusMethylibium
SpeciesMethylibium sp. NZG
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylibium sp. NZG
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Methylibium sp. NZG contig_18, whole genome shotgun sequence.

Gene Summary

Adenine Count

764266 bp

Thymine Count

769586 bp

Guanine Count

1628487 bp

Cytosine Count

1620912 bp

Genome Length

4783251 bp

Protein-coding Genes

4000 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinAD742_20445Not AvailableNegative4490354 - 449111827337.6
abc transporter permeaseAD742_20455Not AvailableNegative4492121 - 449300530976.8
abc transporter substrate-binding proteinAD742_20460Q8FYS9Negative4493171 - 449433140490.8
shikimate dehydrogenaseAD742_20465Q1AWA3Negative4494392 - 449525830099.5
abc transporter substrate-binding proteinAD742_20475A1WPV4Negative4496352 - 449735935910.4
l-dehydroascorbate transporter large permease subunitAD742_20480P37675Negative4497428 - 449870844792.5
c4-dicarboxylate abc transporter permeaseAD742_20485P44994Negative4498705 - 449928621078.2
tetr family transcriptional regulatorAD742_20490Not AvailableNegative4499426 - 450012426434.0
hypothetical proteinAD742_20495Not AvailableNegative4500194 - 450186162529.9
30s ribosomal protein s12AD742_20505A2SLG2Positive4502846 - 450322313961.0

Displaying genes 3811 – 3820 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

318 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 318 metabolites

Health Effects

No health effects information available for this bacterium.