Methylibium sp. NZG

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Sphaerotilaceae

Genus

Methylibium

Description

Methylibium sp. NZG is a Gram-negative bacterium characterized by its bacilli shape and the presence of flagella, which enable motility. This organism has a single replicon, suggesting a streamlined genomic organization. The strain is cataloged under the accession number LGRD00000000.1, indicating its availability for further study and characterization. Being a member of the Methylibium genus, this bacterium is likely involved in methylotrophic metabolism, which allows it to utilize methanol and other one-carbon compounds as carbon sources. Such metabolic capabilities can play a significant role in biogeochemical cycling, particularly in environments rich in organic compounds. The motile nature of Methylibium sp. NZG, facilitated by its flagella, may enhance its ability to navigate through varied environments, potentially leading to interactions with other microbial communities. This adaptability could contribute to its ecological niche, helping to establish its role in nutrient cycling and decomposition processes. In summary, Methylibium sp. NZG demonstrates significant traits, including its Gram-negative classification, bacilli shape, flagella presence, and a single replicon, which collectively highlight its ecological potential in environments where methylotrophic bacteria are crucial for organic matter processing and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilySphaerotilaceae
GenusMethylibium
SpeciesMethylibium sp. NZG
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Methylibium sp. NZG
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Methylibium sp. NZG contig_18, whole genome shotgun sequence.

Gene Summary

Adenine Count

764266 bp

Thymine Count

769586 bp

Guanine Count

1628487 bp

Cytosine Count

1620912 bp

Genome Length

4783251 bp

Protein-coding Genes

4000 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinAD742_15135Not AvailablePositive3338211 - 333920635047.8
3-oxoacyl-acp reductaseAD742_15140P73574Positive3339256 - 334004727430.0
hypothetical proteinAD742_15145P22862Positive3340177 - 334101930748.9
membrane proteinAD742_15150Not AvailableNegative3344183 - 334600063563.9
abc transporter substrate-binding proteinAD742_15155P44542Negative3346164 - 334718937385.0
pyruvate dehydrogenaseAD742_15160Q5SLR3Negative3347255 - 334822634165.2
acetoin dehydrogenaseAD742_15165O31404Negative3348223 - 334923335090.0
hypothetical proteinAD742_15175P9WL94Positive3350730 - 335189943222.1
urease accessory protein uregAD742_15180Q12DU6Negative3351889 - 335254823485.6
adenylate cyclaseAD742_15185Not AvailableNegative3352860 - 335339919402.3

Displaying genes 2821 – 2830 of 4053 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

318 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002654-formylbenzenesulfonateC7H5O4SChemical structure of 4-formylbenzenesulfonateNot available
Average185.17Da
Monoisotopic184.991403395Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 318 metabolites

Health Effects

No health effects information available for this bacterium.