Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVO44_04455 | Not Available | Positive | 934771 - 936006 | 45244.0 |
| peptide abc transporter substrate-binding protein | AVO44_04460 | Not Available | Positive | 936404 - 938032 | 60563.5 |
| oligopeptide transporter permease | AVO44_04465 | Not Available | Positive | 938099 - 939022 | 33762.8 |
| peptide abc transporter permease | AVO44_04470 | Not Available | Positive | 939034 - 939963 | 33830.1 |
| abc transporter atp-binding protein | AVO44_04475 | Not Available | Positive | 939965 - 941770 | 66144.9 |
| utp--glucose-1-phosphate uridylyltransferase | AVO44_04480 | Not Available | Positive | 942078 - 942971 | 32138.7 |
| hypothetical protein | AVO44_04485 | Not Available | Positive | 943185 - 944261 | 36914.8 |
| gdp-fucose synthetase | AVO44_04490 | Not Available | Negative | 944295 - 945272 | 35966.1 |
| gdp-mannose 4,6 dehydratase | AVO44_04495 | Not Available | Negative | 945283 - 946407 | 42329.2 |
| phytanoyl-coa dioxygenase | AVO44_04500 | Not Available | Negative | 946613 - 947494 | 32510.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
