Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane chaperone skp | AVO44_00390 | Not Available | Positive | 81643 - 82203 | 20377.3 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | AVO44_00395 | Not Available | Positive | 82276 - 82749 | 17428.3 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | AVO44_00400 | Not Available | Positive | 82746 - 83531 | 27905.5 |
| phosphatidate cytidylyltransferase | AVO44_00405 | Not Available | Positive | 83536 - 84330 | 27453.4 |
| lipid-a-disaccharide synthase | AVO44_00410 | Not Available | Positive | 84330 - 85487 | 41487.6 |
| hypothetical protein | AVO44_00415 | Not Available | Positive | 85487 - 86068 | 20119.1 |
| trna(5-methylaminomethyl-2-thiouridylate)- methyltransferase | AVO44_00420 | Not Available | Negative | 86065 - 87210 | 41669.4 |
| hypothetical protein | AVO44_00425 | Not Available | Positive | 87340 - 87633 | 10784.0 |
| two-component system response regulator | AVO44_00430 | Not Available | Positive | 87717 - 88433 | 26801.5 |
| dna ligase (nad(+)) liga | AVO44_00435 | Not Available | Positive | 88553 - 90679 | 76815.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
