Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVO44_00340 | Not Available | Positive | 70192 - 70983 | 28678.6 |
| hypothetical protein | AVO44_00345 | Not Available | Positive | 70988 - 71692 | 25715.0 |
| dimethylsulfoniopropionate demethylase | AVO44_00350 | Not Available | Positive | 71914 - 73017 | 40751.8 |
| acryloyl-coa reductase | AVO44_00355 | Not Available | Positive | 73119 - 74114 | 34804.9 |
| ribosome recycling factor | AVO44_00360 | Not Available | Positive | 74300 - 74863 | 20925.1 |
| udp pyrophosphate synthase | AVO44_00365 | Not Available | Positive | 74873 - 75598 | 27358.6 |
| phosphatidate cytidylyltransferase | AVO44_00370 | Not Available | Positive | 75595 - 76377 | 27596.2 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | AVO44_00375 | Not Available | Positive | 76377 - 77549 | 42009.1 |
| rip metalloprotease rsep | AVO44_00380 | Not Available | Positive | 77554 - 78906 | 47945.9 |
| outer membrane protein assembly factor bama | AVO44_00385 | Not Available | Positive | 79252 - 81612 | 87243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
