Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation protein paay | AVO44_03895 | Not Available | Negative | 798363 - 798983 | 22322.0 |
| tetr family transcriptional regulator | AVO44_03900 | Not Available | Negative | 799243 - 799839 | 22852.5 |
| phenylacetate--coa ligase | AVO44_03905 | Not Available | Negative | 799843 - 801153 | 48235.8 |
| phenylacetic acid degradation protein paad | AVO44_03910 | Not Available | Negative | 801177 - 801602 | 14990.6 |
| enoyl-coa hydratase | AVO44_03915 | Not Available | Negative | 801605 - 802390 | 27844.4 |
| enoyl-coa hydratase | AVO44_03920 | Not Available | Positive | 802494 - 804521 | 72959.3 |
| c4-dicarboxylate abc transporter substrate-binding protein | AVO44_03925 | Not Available | Positive | 804599 - 805621 | 36238.9 |
| c4-dicarboxylate abc transporter permease | AVO44_03930 | Not Available | Positive | 805679 - 806185 | 18649.4 |
| c4-dicarboxylate abc transporter permease | AVO44_03935 | Not Available | Positive | 806182 - 807534 | 47806.0 |
| cytochrome | AVO44_03940 | Not Available | Positive | 807534 - 808721 | 44122.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
