Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase | AVO44_03540 | Not Available | Negative | 726752 - 727852 | 39109.6 |
| acetylpolyamine aminohydrolase | AVO44_03545 | Not Available | Negative | 727849 - 728874 | 36708.2 |
| hypothetical protein | AVO44_03550 | Not Available | Negative | 728871 - 729347 | 17236.5 |
| 3-keto-5-aminohexanoate cleavage protein | AVO44_03555 | Not Available | Negative | 729347 - 730273 | 33850.9 |
| aminotransferase | AVO44_03560 | Not Available | Negative | 730275 - 731606 | 48033.9 |
| abc transporter atp-binding protein | AVO44_03565 | Not Available | Negative | 731608 - 732684 | 38410.1 |
| spermidine/putrescine abc transporter substrate-binding protein | AVO44_03570 | Not Available | Negative | 732743 - 733882 | 42148.3 |
| spermidine/putrescine abc transporter permease | AVO44_03575 | Not Available | Negative | 733938 - 734723 | 28293.8 |
| abc transporter permease | AVO44_03580 | Not Available | Negative | 734738 - 735604 | 31533.6 |
| lysr family transcriptional regulator | AVO44_03585 | Not Available | Positive | 735697 - 736665 | 35949.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
