Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | AVO44_03240 | Not Available | Negative | 657283 - 658494 | 43060.8 |
| thymidine phosphorylase | AVO44_03245 | Not Available | Negative | 658491 - 659798 | 45011.1 |
| cytidine deaminase | AVO44_03250 | Not Available | Negative | 659803 - 660195 | 13457.0 |
| cupin | AVO44_03255 | Not Available | Negative | 660286 - 661383 | 40923.0 |
| hypothetical protein | AVO44_03260 | Not Available | Negative | 661352 - 662047 | 24778.6 |
| malate dehydrogenase | AVO44_03265 | Not Available | Positive | 662230 - 664503 | 81832.7 |
| propionate--coa ligase | AVO44_03270 | Not Available | Positive | 664765 - 666654 | 68989.4 |
| amidase | AVO44_03275 | Not Available | Positive | 666748 - 668187 | 51589.3 |
| nad(+) kinase | AVO44_03280 | Not Available | Negative | 668441 - 669202 | 27656.4 |
| serine hydroxymethyltransferase | AVO44_03285 | Not Available | Positive | 669370 - 670665 | 46243.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
