Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p | AVO44_02990 | Not Available | Negative | 605925 - 606488 | 21027.1 |
| elongation factor p | AVO44_02995 | Not Available | Positive | 606707 - 607027 | 11540.5 |
| cobalamin biosynthesis protein cobq | AVO44_03000 | Not Available | Positive | 607189 - 608646 | 51984.3 |
| hypothetical protein | AVO44_03005 | Not Available | Negative | 608649 - 609392 | 27169.4 |
| transporter | AVO44_03010 | Not Available | Negative | 609467 - 610885 | 51206.3 |
| protein-l-isoaspartate o-methyltransferase | AVO44_03015 | Not Available | Negative | 610983 - 611636 | 23530.3 |
| Trna-cys | Not Available | Not Available | Positive | 611865 - 611938 | Not Available |
| hypothetical protein | AVO44_03025 | Not Available | Positive | 612203 - 613579 | 53122.0 |
| 3-hydroxyisobutyrate dehydrogenase | AVO44_03030 | Not Available | Negative | 613772 - 614728 | 34048.1 |
| lysr family transcriptional regulator | AVO44_03035 | Not Available | Positive | 614831 - 615715 | 31987.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
