Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase | AVO44_02285 | Not Available | Positive | 464274 - 465650 | 48736.1 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | AVO44_02290 | Not Available | Positive | 465665 - 466969 | 44997.8 |
| serine acetyltransferase | AVO44_02295 | Not Available | Negative | 467175 - 467984 | 29308.6 |
| hypothetical protein | AVO44_02300 | Not Available | Negative | 468149 - 468439 | 10900.3 |
| dead/deah box helicase | AVO44_02310 | Not Available | Positive | 471830 - 473086 | 45486.4 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | AVO44_02315 | Not Available | Negative | 473127 - 474287 | 42141.8 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | AVO44_02320 | Not Available | Negative | 474288 - 475553 | 43834.7 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | AVO44_02325 | Not Available | Negative | 475752 - 476495 | 27055.4 |
| acetyltransferase | AVO44_02330 | Not Available | Negative | 476614 - 477153 | 20008.0 |
| acyl carrier protein | AVO44_02335 | Not Available | Negative | 477291 - 477524 | 8363.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
