Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase | AVO44_02135 | Not Available | Negative | 429325 - 430719 | 49623.5 |
| peptide chain release factor 2 | AVO44_02140 | Not Available | Negative | 430892 - 432016 | 41593.3 |
| penicillin-binding protein | AVO44_02145 | Not Available | Negative | 432107 - 434593 | 91682.5 |
| n-acetylmuramoyl-l-alanine amidase | AVO44_02150 | Not Available | Negative | 434689 - 435909 | 44347.8 |
| 1-aminocyclopropane-1-carboxylate deaminase | AVO44_02155 | Not Available | Negative | 435976 - 437139 | 41798.9 |
| peptidase m48 | AVO44_02160 | Not Available | Positive | 437138 - 438520 | 49727.6 |
| disulfide bond formation protein dsba | AVO44_02165 | Not Available | Positive | 438517 - 439275 | 27394.5 |
| hypothetical protein | AVO44_02170 | Not Available | Positive | 439582 - 440481 | 32814.6 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | AVO44_02175 | Not Available | Negative | 440639 - 441760 | 39711.8 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | AVO44_02180 | Not Available | Negative | 441832 - 443043 | 43154.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
