Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l4 | AVO44_19355 | Not Available | Negative | 4000148 - 4000765 | 22337.1 |
| 50s ribosomal protein l3 | AVO44_19360 | Not Available | Negative | 4000762 - 4001496 | 25586.8 |
| 30s ribosomal protein s10 | AVO44_19365 | Not Available | Negative | 4001515 - 4001829 | 11790.4 |
| hypothetical protein | AVO44_19370 | Not Available | Positive | 4002058 - 4002513 | 16808.0 |
| lysine transporter lyse | AVO44_19380 | Not Available | Positive | 4003304 - 4003930 | 22297.6 |
| hypothetical protein | AVO44_19385 | Not Available | Negative | 4003969 - 4004562 | 21809.4 |
| hypothetical protein | AVO44_19390 | Not Available | Positive | 4004768 - 4005082 | 11160.5 |
| adenosylhomocysteinase | AVO44_19395 | Not Available | Positive | 4005183 - 4006571 | 50593.9 |
| hypothetical protein | AVO44_19400 | Not Available | Positive | 4006858 - 4007199 | 12489.0 |
| ubiquinol-cytochrome c reductase | AVO44_19405 | Not Available | Negative | 4007558 - 4007980 | 15964.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
