Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | AVO44_18580 | Not Available | Positive | 3844713 - 3845555 | 31581.4 |
| amino acid decarboxylase | AVO44_18585 | Not Available | Positive | 3845635 - 3847032 | 51158.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | AVO44_18590 | Not Available | Positive | 3847029 - 3847883 | 31251.8 |
| 2-oxo-hepta-3-ene-1,7-dioate hydratase | AVO44_18595 | Not Available | Positive | 3847880 - 3848680 | 28776.3 |
| marr family transcriptional regulator | AVO44_18600 | Not Available | Negative | 3848778 - 3849218 | 16369.9 |
| glutathione s-transferase | AVO44_18605 | Not Available | Positive | 3849315 - 3850025 | 26767.1 |
| hypothetical protein | AVO44_18610 | Not Available | Negative | 3850215 - 3850481 | 10370.3 |
| hypothetical protein | AVO44_18615 | Not Available | Negative | 3850558 - 3850950 | 14790.0 |
| hypothetical protein | AVO44_18620 | Not Available | Negative | 3851189 - 3853321 | 78468.0 |
| hypothetical protein | AVO44_18625 | Not Available | Negative | 3853425 - 3853898 | 17557.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
