Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | AVO44_17585 | Not Available | Positive | 3627423 - 3628256 | 29616.6 |
| dephospho-coa kinase | AVO44_17590 | Not Available | Positive | 3628253 - 3628846 | 21292.6 |
| dna polymerase iii subunit epsilon | AVO44_17595 | Not Available | Positive | 3628839 - 3629561 | 26591.6 |
| preprotein translocase subunit secb | AVO44_17600 | Not Available | Negative | 3629589 - 3630086 | 18640.5 |
| exlusion protein fxsa | AVO44_17605 | Not Available | Negative | 3630141 - 3630641 | 18058.3 |
| preprotein translocase subunit tim44 | AVO44_17610 | Not Available | Positive | 3630749 - 3631408 | 24237.7 |
| murein transglycosylase | AVO44_17615 | Not Available | Positive | 3631405 - 3632445 | 37900.4 |
| dna mismatch repair protein muts | AVO44_17620 | Not Available | Positive | 3632445 - 3633032 | 22052.1 |
| mfs transporter | AVO44_17625 | Not Available | Negative | 3633029 - 3634234 | 43575.5 |
| hypothetical protein | AVO44_17630 | Not Available | Negative | 3634246 - 3635343 | 40205.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
