Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter atp-binding protein urtd | AVO44_17030 | Not Available | Positive | 3510883 - 3511623 | 26891.5 |
| urea abc transporter atp-binding subunit urte | AVO44_17035 | Not Available | Positive | 3511604 - 3512320 | 25952.6 |
| hypothetical protein | AVO44_17045 | Not Available | Positive | 3513087 - 3514292 | 44398.1 |
| short-chain dehydrogenase | AVO44_17050 | Not Available | Positive | 3514423 - 3515259 | 29677.1 |
| Trna-lys | Not Available | Not Available | Positive | 3515709 - 3515784 | Not Available |
| diaminopimelate epimerase | AVO44_17060 | Not Available | Positive | 3515994 - 3516836 | 30160.7 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | AVO44_17065 | Not Available | Positive | 3516833 - 3518089 | 46280.7 |
| hypothetical protein | AVO44_17070 | Not Available | Negative | 3518101 - 3518514 | 15869.8 |
| cytochrome c | AVO44_17075 | Not Available | Negative | 3518658 - 3519443 | 28630.0 |
| cytochrome b | AVO44_17080 | Not Available | Negative | 3519461 - 3520804 | 50573.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
