Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | AVO44_16480 | Not Available | Positive | 3400187 - 3400483 | 11191.3 |
| 30s ribosomal protein s16 | AVO44_16485 | Not Available | Positive | 3400553 - 3400942 | 14343.1 |
| 5,6-dimethylbenzimidazole synthase | AVO44_16490 | Not Available | Positive | 3401006 - 3401590 | 21928.3 |
| 16s rrna-processing protein rimm | AVO44_16495 | Not Available | Positive | 3401735 - 3402238 | 17969.5 |
| hypothetical protein | AVO44_16500 | Not Available | Positive | 3402238 - 3403053 | 30901.2 |
| trna (guanine-n1)-methyltransferase | AVO44_16505 | Not Available | Positive | 3403050 - 3403847 | 29466.4 |
| glycoside hydrolase | AVO44_16510 | Not Available | Negative | 3403844 - 3404644 | 30129.7 |
| 50s ribosomal protein l19 | AVO44_16515 | Not Available | Positive | 3405026 - 3405409 | 13942.9 |
| 50s ribosomal protein l31 | AVO44_16520 | Not Available | Positive | 3405421 - 3405642 | 8091.59 |
| hypothetical protein | AVO44_16525 | Not Available | Positive | 3405822 - 3406049 | 8683.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
