Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | AVO44_16280 | Not Available | Negative | 3369428 - 3369997 | 21222.6 |
| nyn domain-containing protein | AVO44_16285 | Not Available | Positive | 3370138 - 3370713 | 21912.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | AVO44_16290 | Not Available | Positive | 3370908 - 3371858 | 34258.2 |
| hypothetical protein | AVO44_16295 | Not Available | Positive | 3371855 - 3372307 | 16159.0 |
| methyltransferase type 11 | AVO44_16300 | Not Available | Positive | 3372304 - 3372888 | 21014.8 |
| ribonuclease h | AVO44_16305 | Not Available | Positive | 3372881 - 3373348 | 17093.2 |
| hypothetical protein | AVO44_16310 | Not Available | Positive | 3373345 - 3373968 | 21859.2 |
| hypothetical protein | AVO44_16315 | Not Available | Negative | 3374126 - 3374362 | 8396.66 |
| methionyl-trna formyltransferase | AVO44_16320 | Not Available | Negative | 3374368 - 3375282 | 32326.0 |
| peptide deformylase | AVO44_16325 | Not Available | Negative | 3375285 - 3375779 | 18478.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
