Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopropylmalate isomerase | AVO44_15115 | Not Available | Negative | 3138665 - 3138772 | 4087.03 |
| mechanosensitive ion channel protein | AVO44_15120 | Not Available | Positive | 3138863 - 3140215 | 50016.3 |
| ribosomal silencing factor rsfs | AVO44_15125 | Not Available | Positive | 3140380 - 3140739 | 13205.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | AVO44_15130 | Not Available | Positive | 3140784 - 3141254 | 16985.7 |
| flavodoxin | AVO44_15135 | Not Available | Positive | 3141256 - 3141741 | 17177.8 |
| hypothetical protein | AVO44_15140 | Not Available | Negative | 3141745 - 3142092 | 12810.0 |
| hypothetical protein | AVO44_15145 | Not Available | Negative | 3142128 - 3142838 | 26294.4 |
| glycolate oxidase subunit glcd | AVO44_15150 | Not Available | Positive | 3142921 - 3144369 | 51756.3 |
| 2-hydroxy-acid oxidase | AVO44_15155 | Not Available | Positive | 3144392 - 3145492 | 38943.7 |
| 2-hydroxy-acid oxidase | AVO44_15160 | Not Available | Positive | 3145497 - 3146813 | 48300.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
