Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase | AVO44_14515 | Not Available | Positive | 3013667 - 3014122 | 15689.7 |
| molybdopterin biosynthesis protein | AVO44_14520 | Not Available | Positive | 3014122 - 3015189 | 37404.6 |
| peptidase m3 | AVO44_14525 | Not Available | Positive | 3015497 - 3017512 | 74202.2 |
| glyoxylate/hydroxypyruvate reductase a | AVO44_14530 | Not Available | Negative | 3017509 - 3018441 | 33413.3 |
| rod shape-determining protein roda | AVO44_14535 | Not Available | Negative | 3018457 - 3019596 | 41808.2 |
| penicillin-binding protein 2 | AVO44_14540 | Not Available | Negative | 3019593 - 3021542 | 70873.1 |
| rod shape-determining protein mred | AVO44_14545 | Not Available | Negative | 3021542 - 3022072 | 19413.6 |
| rod shape-determining protein mrec | AVO44_14550 | Not Available | Negative | 3022065 - 3022967 | 32792.5 |
| rod shape-determining protein mreb | AVO44_14555 | Not Available | Negative | 3023024 - 3024070 | 36890.9 |
| protein involved in catabolism of external dna | AVO44_14560 | Not Available | Positive | 3024225 - 3025016 | 29595.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
