Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | AVO44_01240 | Not Available | Negative | 250701 - 251858 | 43048.5 |
| phosphoribosylglycinamide formyltransferase | AVO44_01245 | Not Available | Negative | 251974 - 252570 | 21228.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | AVO44_01250 | Not Available | Negative | 252567 - 253613 | 35965.2 |
| Trna-met | Not Available | Not Available | Positive | 253968 - 254041 | Not Available |
| histidine kinase | AVO44_01260 | Not Available | Negative | 254221 - 255540 | 48113.9 |
| mbl fold metallo-hydrolase | AVO44_01265 | Not Available | Positive | 255585 - 256499 | 32424.4 |
| Trna-asn | Not Available | Not Available | Positive | 256577 - 256651 | Not Available |
| dna-binding protein | AVO44_01275 | Not Available | Positive | 256820 - 258124 | 46929.2 |
| hypothetical protein | AVO44_01280 | Not Available | Positive | 258534 - 259175 | 24074.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 259212 - 259609 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
