Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna processing protein dpra | AVO44_12860 | Not Available | Positive | 2684513 - 2685640 | 39338.3 |
| dna topoisomerase i | AVO44_12865 | Not Available | Positive | 2685803 - 2688424 | 97511.0 |
| succinyl-coa--3-ketoacid-coa transferase | AVO44_12870 | Not Available | Positive | 2688525 - 2689229 | 25369.4 |
| succinyl-coa--3-ketoacid-coa transferase | AVO44_12875 | Not Available | Positive | 2689229 - 2689855 | 22051.7 |
| lytic murein transglycosylase | AVO44_12880 | Not Available | Negative | 2689899 - 2690765 | 30179.4 |
| hypothetical protein | AVO44_12885 | Not Available | Positive | 2691117 - 2691320 | 6979.22 |
| hypothetical protein | AVO44_12890 | Not Available | Positive | 2691421 - 2691636 | 7592.14 |
| flp pilus assembly protein cpab | AVO44_12895 | Not Available | Positive | 2691791 - 2692666 | 30937.7 |
| general secretion pathway protein | AVO44_12900 | Not Available | Positive | 2692858 - 2694264 | 49611.1 |
| hypothetical protein | AVO44_12905 | Not Available | Positive | 2694281 - 2694910 | 23051.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
