Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deaminase | AVO44_12210 | Not Available | Negative | 2558506 - 2558994 | 17697.1 |
| thioredoxin | AVO44_12215 | Not Available | Negative | 2559321 - 2559923 | 22571.9 |
| urea abc transporter | AVO44_12220 | Not Available | Positive | 2560564 - 2561802 | 45137.9 |
| urea abc transporter | AVO44_12225 | Not Available | Positive | 2561906 - 2562772 | 29733.4 |
| hypothetical protein | AVO44_12230 | Not Available | Positive | 2562769 - 2563785 | 36119.8 |
| abc transporter atp-binding protein | AVO44_12235 | Not Available | Positive | 2563782 - 2564498 | 25883.2 |
| urea abc transporter atp-binding subunit urte | AVO44_12240 | Not Available | Positive | 2564501 - 2565223 | 26564.6 |
| hypothetical protein | AVO44_12245 | Not Available | Negative | 2565271 - 2566167 | 33677.6 |
| nitrilase | AVO44_12250 | Not Available | Positive | 2566303 - 2567286 | 36028.9 |
| amidase | AVO44_12255 | Not Available | Positive | 2567286 - 2568779 | 53046.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
