Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | AVO44_12055 | Not Available | Negative | 2521582 - 2522793 | 42925.7 |
| 50s ribosomal protein l11 | AVO44_12060 | Not Available | Positive | 2523120 - 2523569 | 15968.5 |
| 50s ribosomal protein l1 | AVO44_12065 | Not Available | Positive | 2523571 - 2524269 | 23891.1 |
| hypothetical protein | AVO44_12070 | Not Available | Negative | 2524343 - 2525368 | 36598.7 |
| hypothetical protein | AVO44_12075 | Not Available | Negative | 2525522 - 2526538 | 38999.4 |
| 50s ribosomal protein l10 | AVO44_12080 | Not Available | Positive | 2526898 - 2527416 | 17919.5 |
| 50s ribosomal protein l7/l12 | AVO44_12085 | Not Available | Positive | 2527496 - 2527873 | 12720.3 |
| dna-directed rna polymerase subunit beta | AVO44_12090 | Not Available | Positive | 2528123 - 2532259 | 153091.0 |
| hypothetical protein | AVO44_12095 | Not Available | Positive | 2532260 - 2532550 | 10201.2 |
| dna-directed rna polymerase subunit beta' | AVO44_12100 | Not Available | Positive | 2532547 - 2536788 | 156536.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
