Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein | AVO44_11400 | Not Available | Positive | 2394058 - 2395143 | 39817.6 |
| abc transporter atp-binding protein | AVO44_11405 | Not Available | Positive | 2395211 - 2396338 | 41904.2 |
| putrescine/spermidine abc transporter permease | AVO44_11410 | Not Available | Positive | 2396338 - 2397228 | 33452.6 |
| spermidine/putrescine abc transporter permease | AVO44_11415 | Not Available | Positive | 2397225 - 2398043 | 29139.2 |
| fad-dependent oxidoreductase | AVO44_11420 | Not Available | Positive | 2398040 - 2399341 | 46751.9 |
| aminoglycoside phosphotransferase | AVO44_11425 | Not Available | Negative | 2399330 - 2400115 | 29256.9 |
| flagellar biosynthesis protein flgd | AVO44_11430 | Not Available | Negative | 2400273 - 2400929 | 23278.8 |
| hypothetical protein | AVO44_11435 | Not Available | Negative | 2400932 - 2402143 | 42342.5 |
| hypothetical protein | AVO44_11440 | Not Available | Positive | 2402279 - 2402560 | 9758.48 |
| flagellar biosynthesis protein flgn | AVO44_11445 | Not Available | Positive | 2402544 - 2402903 | 13633.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
