Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVO44_11300 | Not Available | Positive | 2375449 - 2375826 | 13281.6 |
| 23s rrna (adenine(2503)-c2)-methyltransferase | AVO44_11305 | Not Available | Positive | 2375906 - 2377093 | 44355.3 |
| hypothetical protein | AVO44_11310 | Not Available | Positive | 2377327 - 2377953 | 22731.9 |
| hypothetical protein | AVO44_11315 | Not Available | Negative | 2377956 - 2378300 | 12819.6 |
| molecular chaperone dnaj | AVO44_11320 | Not Available | Negative | 2378297 - 2379214 | 33440.3 |
| hypothetical protein | AVO44_11325 | Not Available | Positive | 2379364 - 2379747 | 13492.5 |
| cystathionine gamma-lyase | AVO44_11330 | Not Available | Negative | 2379748 - 2380845 | 39421.3 |
| lysine decarboxylase | AVO44_11335 | Not Available | Negative | 2380849 - 2381691 | 31451.3 |
| threonine dehydratase | AVO44_11340 | Not Available | Positive | 2381771 - 2382688 | 31038.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AVO44_11345 | Not Available | Positive | 2382797 - 2383624 | 29493.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
