Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc protease | AVO44_10550 | Not Available | Negative | 2225177 - 2226481 | 47026.4 |
| zinc protease | AVO44_10555 | Not Available | Negative | 2226478 - 2227818 | 49175.8 |
| hypothetical protein | AVO44_10560 | Not Available | Negative | 2227901 - 2228419 | 18422.8 |
| signal peptidase ii | AVO44_10565 | Not Available | Negative | 2228470 - 2228940 | 17057.5 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | AVO44_10570 | Not Available | Negative | 2228940 - 2230529 | 56097.8 |
| heparinase | AVO44_10575 | Not Available | Negative | 2230552 - 2232291 | 63369.0 |
| 16s rrna methyltransferase | AVO44_10580 | Not Available | Negative | 2232382 - 2233638 | 44848.0 |
| dihydrodipicolinate reductase | AVO44_10585 | Not Available | Positive | 2233728 - 2233910 | 6755.9 |
| 4-hydroxy-tetrahydrodipicolinate reductase | AVO44_10590 | Not Available | Negative | 2234011 - 2234820 | 28147.8 |
| ribosome-binding factor a | AVO44_10595 | Not Available | Positive | 2234912 - 2235307 | 14912.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
