Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein | AVO44_08595 | Not Available | Positive | 1835716 - 1836918 | 42527.0 |
| d-alanyl-d-alanine carboxypeptidase | AVO44_08600 | Not Available | Positive | 1836896 - 1838101 | 43234.8 |
| thymidylate kinase | AVO44_08605 | Not Available | Positive | 1838098 - 1838721 | 23200.7 |
| dna polymerase iii subunit delta' | AVO44_08610 | Not Available | Positive | 1838733 - 1839854 | 39672.5 |
| luxr family transcriptional regulator | AVO44_08615 | Not Available | Positive | 1839851 - 1840657 | 29376.8 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | AVO44_08620 | Not Available | Positive | 1840654 - 1841451 | 29299.9 |
| malonate transporter | AVO44_08625 | Not Available | Positive | 1841494 - 1842426 | 33390.6 |
| cobalamin biosynthesis protein cbix | AVO44_08630 | Not Available | Positive | 1842498 - 1843205 | 25159.1 |
| diguanylate cyclase | AVO44_08635 | Not Available | Negative | 1843218 - 1844243 | 36528.3 |
| heme no-binding protein | AVO44_08640 | Not Available | Negative | 1844240 - 1844827 | 21829.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
