Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVO44_07985 | Not Available | Negative | 1709452 - 1709664 | 7741.04 |
| hypothetical protein | AVO44_07990 | Not Available | Negative | 1709661 - 1710038 | 14190.0 |
| plp-dependent lyase/thiolase | AVO44_07995 | Not Available | Positive | 1710193 - 1711236 | 36086.6 |
| peptidase m24 | AVO44_08000 | Not Available | Positive | 1711233 - 1712378 | 41409.5 |
| asp/glu racemase | AVO44_08005 | Not Available | Positive | 1712375 - 1713085 | 25653.5 |
| spermidine/putrescine abc transporter atp-binding protein | AVO44_08010 | Not Available | Positive | 1713252 - 1714343 | 40501.8 |
| spermidine/putrescine abc transporter substrate-binding protein | AVO44_08015 | Not Available | Positive | 1714455 - 1715555 | 40211.2 |
| abc transporter permease | AVO44_08020 | Not Available | Positive | 1715622 - 1716893 | 47082.4 |
| polyamine abc transporter permease | AVO44_08025 | Not Available | Positive | 1716899 - 1718110 | 43985.1 |
| creatininase | AVO44_08030 | Not Available | Positive | 1718271 - 1719491 | 44789.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
