Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AVO44_07880 | Not Available | Positive | 1681568 - 1682503 | 33694.2 |
| hypothetical protein | AVO44_07885 | Not Available | Positive | 1682602 - 1685088 | 90936.4 |
| lysr family transcriptional regulator | AVO44_07890 | Not Available | Negative | 1685642 - 1686514 | 32786.1 |
| abc transporter substrate-binding protein | AVO44_07895 | Not Available | Positive | 1686602 - 1687735 | 41996.5 |
| spermidine/putrescine abc transporter permease | AVO44_07900 | Not Available | Positive | 1687792 - 1688679 | 32262.9 |
| polyamine abc transporter permease | AVO44_07905 | Not Available | Positive | 1688683 - 1689504 | 29224.4 |
| abc transporter atp-binding protein | AVO44_07910 | Not Available | Positive | 1689501 - 1690619 | 40818.0 |
| ribulose phosphate epimerase | AVO44_07915 | Not Available | Positive | 1690747 - 1691643 | 34158.4 |
| aminomethyltransferase | AVO44_07920 | Not Available | Positive | 1691643 - 1692368 | 26392.6 |
| hypothetical protein | AVO44_07925 | Not Available | Negative | 1693356 - 1693634 | 10590.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
