Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein t | AVO44_07675 | Not Available | Negative | 1619819 - 1622236 | 89002.6 |
| hypothetical protein | AVO44_07680 | Not Available | Negative | 1622493 - 1623800 | 47435.1 |
| recombinase xerd | AVO44_07685 | Not Available | Negative | 1623864 - 1624817 | 34991.1 |
| hypothetical protein | AVO44_07690 | Not Available | Negative | 1624820 - 1626343 | 54940.3 |
| shikimate kinase | AVO44_07695 | Not Available | Positive | 1626562 - 1627149 | 21439.7 |
| 3-dehydroquinate synthase | AVO44_07700 | Not Available | Positive | 1627149 - 1628261 | 39385.4 |
| protease | AVO44_07705 | Not Available | Negative | 1628262 - 1629332 | 38094.0 |
| single-stranded dna-binding protein | AVO44_07710 | Not Available | Negative | 1629351 - 1629854 | 17797.6 |
| lytic transglycosylase | AVO44_07715 | Not Available | Positive | 1630061 - 1630639 | 21664.1 |
| abc transporter atp-binding protein | AVO44_07720 | Not Available | Negative | 1630798 - 1632885 | 76440.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
