Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| light-harvesting protein | AVO44_06375 | Not Available | Positive | 1348237 - 1348386 | 5559.57 |
| light-harvesting protein | AVO44_06380 | Not Available | Positive | 1348400 - 1348558 | 5920.44 |
| photosynthetic reaction center subunit l | AVO44_06385 | Not Available | Positive | 1348685 - 1349524 | 31246.2 |
| photosynthetic reaction center subunit m | AVO44_06390 | Not Available | Positive | 1349528 - 1350514 | 37351.1 |
| photosynthetic reaction center cytochrome c subunit | AVO44_06395 | Not Available | Positive | 1350516 - 1351631 | 41321.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AVO44_06400 | Not Available | Positive | 1351817 - 1353739 | 67331.7 |
| cytochrome c | AVO44_06405 | Not Available | Negative | 1353736 - 1354161 | 15050.7 |
| 5-aminolevulinate synthase | AVO44_06410 | Not Available | Negative | 1354229 - 1355443 | 44473.4 |
| hypothetical protein | AVO44_06415 | Not Available | Negative | 1355433 - 1356236 | 29594.6 |
| magnesium-protoporphyrin ix monomethyl ester cyclase | AVO44_06420 | Not Available | Negative | 1356236 - 1357363 | 43354.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
