Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria profundi |
| Strain | ZGT108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
923858 bp
Thymine Count
920562 bp
Guanine Count
1208924 bp
Cytosine Count
1204711 bp
Genome Length
4258055 bp
Protein-coding Genes
4008 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ap endonuclease | AVO44_06175 | Not Available | Positive | 1305251 - 1306306 | 39159.6 |
| oxidoreductase | AVO44_06180 | Not Available | Positive | 1306303 - 1307460 | 41956.6 |
| xylulose kinase | AVO44_06185 | Not Available | Positive | 1307542 - 1308999 | 51783.7 |
| rok family transcriptional regulator | AVO44_06190 | Not Available | Negative | 1309119 - 1310333 | 43303.3 |
| xylose isomerase | AVO44_06195 | Not Available | Positive | 1310722 - 1312029 | 48890.5 |
| methylamine utilization protein maug | AVO44_06200 | Not Available | Negative | 1312144 - 1313424 | 46775.0 |
| hypothetical protein | AVO44_06205 | Not Available | Positive | 1313431 - 1313901 | 17580.1 |
| c4-dicarboxylate abc transporter substrate-binding protein | AVO44_06210 | Not Available | Negative | 1313935 - 1314996 | 38146.0 |
| c4-dicarboxylate abc transporter permease | AVO44_06215 | Not Available | Negative | 1315021 - 1316310 | 45711.1 |
| c4-dicarboxylate abc transporter permease | AVO44_06220 | Not Available | Negative | 1316311 - 1316898 | 20940.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
