Arthrobacter sp. RIT-PI-e

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Arthrobacter

Description

Arthrobacter sp. RIT-PI-e is characterized by the presence of flagella, which suggests that this bacterium is motile. This mobility can facilitate its ability to navigate various environments, potentially enhancing its adaptability and ecological versatility. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficient replication and survival strategies. The accession number for Arthrobacter sp. RIT-PI-e is LGIU00000000.1, which provides a reference point for genetic and genomic studies related to this strain. This accession can be used to access genomic data, allowing for further exploration of its genetic makeup and functional capabilities. The motility afforded by flagella may play a significant role in the ecological interactions of Arthrobacter sp. RIT-PI-e, particularly in nutrient acquisition and colonization of substrates. This trait could enable the bacterium to thrive in diverse environments, including soil and other ecosystems where it may contribute to nutrient cycling and organic matter decomposition. The presence of a single replicon could also suggest adaptation to specific ecological niches, as a streamlined genome may reduce the metabolic burden and enhance survival in fluctuating conditions. Overall, these characteristics highlight the potential ecological importance of Arthrobacter sp. RIT-PI-e in its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusArthrobacter
SpeciesArthrobacter sp. RIT-PI-e
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arthrobacter sp. RIT-PI-e NODE_28_length_39458_cov_24.7003_ID_55,

Gene Summary

Adenine Count

527720 bp

Thymine Count

531412 bp

Guanine Count

1202006 bp

Cytosine Count

1197952 bp

Genome Length

3459090 bp

Protein-coding Genes

2792 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAC792_00355Q5Z2R3Negative79115 - 7986424675.0
card family transcriptional regulatorAC792_00360P9WJG2Negative79953 - 8043518008.7
hypothetical proteinAC792_00365Not AvailablePositive80744 - 8122016577.9
xre family transcriptional regulatorAC792_00370O07130Negative81302 - 8198225138.3
histidine kinaseAC792_00375A0QR01Negative81979 - 8324144602.2
phou family transcriptional regulatorAC792_00380Q50047Positive83413 - 8407224178.7
phosphoglycerate mutaseAC792_00385B8HCQ9Negative84175 - 8492127561.3
methylaseAC792_00390Not AvailablePositive85011 - 8584430645.7
membrane proteinAC792_00395Not AvailableNegative85877 - 8620611576.3
cystathionine gamma-synthaseAC792_00400P66876Negative86269 - 8736738297.0

Displaying genes 71 – 80 of 2844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

209 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 209 metabolites

Health Effects

No health effects information available for this bacterium.