Arthrobacter sp. RIT-PI-e

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Arthrobacter

Description

Arthrobacter sp. RIT-PI-e is characterized by the presence of flagella, which suggests that this bacterium is motile. This mobility can facilitate its ability to navigate various environments, potentially enhancing its adaptability and ecological versatility. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficient replication and survival strategies. The accession number for Arthrobacter sp. RIT-PI-e is LGIU00000000.1, which provides a reference point for genetic and genomic studies related to this strain. This accession can be used to access genomic data, allowing for further exploration of its genetic makeup and functional capabilities. The motility afforded by flagella may play a significant role in the ecological interactions of Arthrobacter sp. RIT-PI-e, particularly in nutrient acquisition and colonization of substrates. This trait could enable the bacterium to thrive in diverse environments, including soil and other ecosystems where it may contribute to nutrient cycling and organic matter decomposition. The presence of a single replicon could also suggest adaptation to specific ecological niches, as a streamlined genome may reduce the metabolic burden and enhance survival in fluctuating conditions. Overall, these characteristics highlight the potential ecological importance of Arthrobacter sp. RIT-PI-e in its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusArthrobacter
SpeciesArthrobacter sp. RIT-PI-e
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arthrobacter sp. RIT-PI-e NODE_28_length_39458_cov_24.7003_ID_55,

Gene Summary

Adenine Count

527720 bp

Thymine Count

531412 bp

Guanine Count

1202006 bp

Cytosine Count

1197952 bp

Genome Length

3459090 bp

Protein-coding Genes

2792 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma-glutamyl phosphate reductaseAC792_00150A6WDM6Negative23633 - 2500347948.2
gamma-glutamyl kinaseAC792_00155Q9RDJ9Negative25050 - 2621038904.6
gtpase cgtaAC792_00160A0JXJ8Negative26216 - 2779956076.4
50s ribosomal protein l27AC792_00165A1R788Negative27911 - 281719033.74
50s ribosomal protein l21AC792_00170A0JXK0Negative28229 - 2853710978.5
hypothetical proteinAC792_00175Q8FTH8Negative28761 - 3035355249.3
ribonuclease eAC792_00180A0R152Negative30545 - 33793115108.0
5s ribosomal rnaNot AvailableNot AvailablePositive35856 - 35972Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive36284 - 39448Not Available
1-deoxy-d-xylulose-5-phosphate synthaseAC792_00185B8HH36Negative34555 - 3652870563.8

Displaying genes 31 – 40 of 2844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

209 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 209 metabolites

Health Effects

No health effects information available for this bacterium.