Arthrobacter sp. RIT-PI-e

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Micrococcaceae

Genus

Arthrobacter

Description

Arthrobacter sp. RIT-PI-e is characterized by the presence of flagella, which suggests that this bacterium is motile. This mobility can facilitate its ability to navigate various environments, potentially enhancing its adaptability and ecological versatility. The organism has a single replicon, indicating a streamlined genomic structure that may contribute to its efficient replication and survival strategies. The accession number for Arthrobacter sp. RIT-PI-e is LGIU00000000.1, which provides a reference point for genetic and genomic studies related to this strain. This accession can be used to access genomic data, allowing for further exploration of its genetic makeup and functional capabilities. The motility afforded by flagella may play a significant role in the ecological interactions of Arthrobacter sp. RIT-PI-e, particularly in nutrient acquisition and colonization of substrates. This trait could enable the bacterium to thrive in diverse environments, including soil and other ecosystems where it may contribute to nutrient cycling and organic matter decomposition. The presence of a single replicon could also suggest adaptation to specific ecological niches, as a streamlined genome may reduce the metabolic burden and enhance survival in fluctuating conditions. Overall, these characteristics highlight the potential ecological importance of Arthrobacter sp. RIT-PI-e in its habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrococcaceae
GenusArthrobacter
SpeciesArthrobacter sp. RIT-PI-e
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arthrobacter sp. RIT-PI-e NODE_28_length_39458_cov_24.7003_ID_55,

Gene Summary

Adenine Count

527720 bp

Thymine Count

531412 bp

Guanine Count

1202006 bp

Cytosine Count

1197952 bp

Genome Length

3459090 bp

Protein-coding Genes

2792 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseAC792_07845P9WPG2Positive1737855 - 173843921127.7
damage-inducible protein cinaAC792_07850A4J5U0Positive1738436 - 173892716149.1
transcriptional regulatorAC792_07855A0QVU1Positive1739050 - 173949016347.3
marr family transcriptional regulatorAC792_07860Not AvailableNegative1739557 - 174006318454.9
histidine kinaseAC792_07865Not AvailablePositive1740269 - 17404878641.14
recombinase recaAC792_07870A0JUY4Positive1740701 - 174174437119.6
hypothetical proteinAC792_07875O50488Positive1742041 - 174265522708.5
(dimethylallyl)adenosine trna methylthiotransferaseAC792_07880A1R550Positive1742724 - 174427456257.8
trna delta(2)-isopentenylpyrophosphate transferaseAC792_07885A0JUY7Positive1744271 - 174518233114.5
gtp-binding proteinAC792_07900D9R4W7Positive1746957 - 174856457887.7

Displaying genes 1401 – 1410 of 2844 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

209 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da

Displaying 1–10 of 209 metabolites

Health Effects

No health effects information available for this bacterium.