Xanthomonas sp. ISO98C4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas sp. ISO98C4 is a rod-shaped bacterium that possesses flagella, enabling motility. The presence of flagella indicates that this organism may exhibit active movement in various environments, which is a characteristic feature of many species within the Xanthomonas genus. The genomic structure of Xanthomonas sp. ISO98C4 is notable for containing three replicons, suggesting a complex genetic organization. This trait may contribute to the organism's adaptability and evolutionary potential, as the presence of multiple replicons can facilitate a diverse range of genetic functions and regulatory mechanisms. Accessions associated with Xanthomonas sp. ISO98C4 include NZ_CP012061.1, NZ_CP012060.1, and NZ_CP012062.1. These identifiers are linked to its genomic sequences, allowing for further study and comparison with other strains within the Xanthomonas genus. In summary, Xanthomonas sp. ISO98C4's rod shape, flagellar motility, and unique genomic structure with multiple replicons exemplify its potential ecological roles. Its mobility may enable it to interact with various environments, possibly influencing plant health and contributing to the dynamics of microbial communities. Understanding the traits of this bacterium can provide insights into its behavior and ecological significance in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas sp. ISO98C4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas sp. ISO98C4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence.

Gene Summary

Adenine Count

10498 bp

Thymine Count

12043 bp

Guanine Count

18682 bp

Cytosine Count

17722 bp

Genome Length

58945 bp

Protein-coding Genes

73 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fumarylacetoacetate hydrolase family proteinAC801_RS22370Not AvailablePositive4861320 - 486217730607.7
l-fuconate dehydrataseAC801_RS22375Not AvailablePositive4862701 - 486402348140.6
l-fucose mutarotaseAC801_RS22380Not AvailableNegative4864468 - 486482713668.3
l-fucose:h+ symporter permeaseAC801_RS22385Not AvailableNegative4864830 - 486613146234.8
iclr family transcriptional regulatorAC801_RS22390Not AvailablePositive4866312 - 486706127063.9
helix-turn-helix domain-containing proteinAC801_RS22395Not AvailablePositive4867187 - 486831442238.3
s41 family peptidaseAC801_RS22400Not AvailablePositive4868467 - 486995453659.1
manganese efflux pump mntp family proteinAC801_RS22405Not AvailablePositive4870208 - 487079219831.7
pas domain-containing hybrid sensor histidine kinase/response regulatorAC801_RS22410Not AvailableNegative4870958 - 4874410126618.0
glycosyl hydrolase 115 family proteinAC801_RS22420Not AvailablePositive4875095 - 487773796441.9

Displaying genes 4381 – 4390 of 4681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.