Xanthomonas sp. ISO98C4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas sp. ISO98C4 is a rod-shaped bacterium that possesses flagella, enabling motility. The presence of flagella indicates that this organism may exhibit active movement in various environments, which is a characteristic feature of many species within the Xanthomonas genus. The genomic structure of Xanthomonas sp. ISO98C4 is notable for containing three replicons, suggesting a complex genetic organization. This trait may contribute to the organism's adaptability and evolutionary potential, as the presence of multiple replicons can facilitate a diverse range of genetic functions and regulatory mechanisms. Accessions associated with Xanthomonas sp. ISO98C4 include NZ_CP012061.1, NZ_CP012060.1, and NZ_CP012062.1. These identifiers are linked to its genomic sequences, allowing for further study and comparison with other strains within the Xanthomonas genus. In summary, Xanthomonas sp. ISO98C4's rod shape, flagellar motility, and unique genomic structure with multiple replicons exemplify its potential ecological roles. Its mobility may enable it to interact with various environments, possibly influencing plant health and contributing to the dynamics of microbial communities. Understanding the traits of this bacterium can provide insights into its behavior and ecological significance in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas sp. ISO98C4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas sp. ISO98C4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence.

Gene Summary

Adenine Count

10498 bp

Thymine Count

12043 bp

Guanine Count

18682 bp

Cytosine Count

17722 bp

Genome Length

58945 bp

Protein-coding Genes

73 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanine--d-alanine ligaseAC801_RS01125Not AvailableNegative240695 - 24179839657.8
scp2 domain-containing proteinAC801_RS01135Not AvailablePositive242033 - 24267722931.4
ubiquinone biosynthesis regulatory protein kinase ubibAC801_RS01140Not AvailablePositive242674 - 24434762544.1
cupin domain-containing proteinAC801_RS01145Not AvailablePositive244357 - 24486017707.8
pseudouridine synthaseAC801_RS01150Not AvailablePositive245037 - 24589131738.4
duf2059 domain-containing proteinAC801_RS01160Not AvailableNegative246408 - 24698621451.1
alternative ribosome rescue aminoacyl-trna hydrolase arfbAC801_RS01165Not AvailablePositive247043 - 24747416048.3
lysophosphatidylcholine acyltransferaseAC801_RS01170Not AvailablePositive247477 - 24810623731.9
isoaspartyl peptidase/l-asparaginase family proteinAC801_RS01175Not AvailablePositive248638 - 24965435056.6
peptidyl-dipeptidase dcpAC801_RS01180Not AvailablePositive249763 - 25193179878.7

Displaying genes 391 – 400 of 4681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.