Xanthomonas sp. ISO98C4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas sp. ISO98C4 is a rod-shaped bacterium that possesses flagella, enabling motility. The presence of flagella indicates that this organism may exhibit active movement in various environments, which is a characteristic feature of many species within the Xanthomonas genus. The genomic structure of Xanthomonas sp. ISO98C4 is notable for containing three replicons, suggesting a complex genetic organization. This trait may contribute to the organism's adaptability and evolutionary potential, as the presence of multiple replicons can facilitate a diverse range of genetic functions and regulatory mechanisms. Accessions associated with Xanthomonas sp. ISO98C4 include NZ_CP012061.1, NZ_CP012060.1, and NZ_CP012062.1. These identifiers are linked to its genomic sequences, allowing for further study and comparison with other strains within the Xanthomonas genus. In summary, Xanthomonas sp. ISO98C4's rod shape, flagellar motility, and unique genomic structure with multiple replicons exemplify its potential ecological roles. Its mobility may enable it to interact with various environments, possibly influencing plant health and contributing to the dynamics of microbial communities. Understanding the traits of this bacterium can provide insights into its behavior and ecological significance in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas sp. ISO98C4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas sp. ISO98C4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas sp. ISO98C4 plasmid pNX59, complete sequence.

Gene Summary

Adenine Count

10498 bp

Thymine Count

12043 bp

Guanine Count

18682 bp

Cytosine Count

17722 bp

Genome Length

58945 bp

Protein-coding Genes

73 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidinol-phosphate transaminaseAC801_RS10455Not AvailablePositive2274115 - 227520638613.2
bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisbAC801_RS10460Not AvailablePositive2275203 - 227633041860.6
imidazole glycerol phosphate synthase subunit hishAC801_RS10465Not AvailablePositive2276327 - 227692921228.9
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomeraseAC801_RS10470Not AvailablePositive2276926 - 227766025818.9
imidazole glycerol phosphate synthase subunit hisfAC801_RS10475Not AvailablePositive2277654 - 227843028254.9
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisieAC801_RS10480Not AvailablePositive2278420 - 227904022246.5
calcineurin-like phosphoesterase c-terminal domain-containing proteinAC801_RS10485Not AvailablePositive2279209 - 228079557719.6
c13 family peptidaseAC801_RS10490Not AvailableNegative2281243 - 228231938585.2
acireductone synthaseAC801_RS10495Not AvailableNegative2282503 - 228320125934.6
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenaseAC801_RS10500Not AvailableNegative2283204 - 228377021215.9

Displaying genes 2171 – 2180 of 4681 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.