Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | EJP69_00305 | Not Available | Negative | 69394 - 70233 | 29705.8 |
| duf748 domain-containing protein | EJP69_00310 | Not Available | Positive | 70905 - 74729 | 134737.0 |
| duf349 domain-containing protein | EJP69_00315 | Not Available | Positive | 74948 - 77800 | 100204.0 |
| hypothetical protein | EJP69_00320 | Not Available | Negative | 77899 - 78495 | 21407.7 |
| zinc-dependent peptidase | EJP69_00325 | Not Available | Negative | 78589 - 79380 | 29512.3 |
| udp-2,3-diacylglucosamine diphosphatase | EJP69_00330 | Not Available | Negative | 79398 - 80174 | 28721.1 |
| peptidyl-prolyl cis-trans isomerase | EJP69_00335 | Not Available | Negative | 80212 - 80724 | 18440.9 |
| peptidyl-prolyl cis-trans isomerase | EJP69_00340 | Not Available | Negative | 80749 - 81342 | 20895.9 |
| tetratricopeptide repeat protein | EJP69_00345 | Not Available | Negative | 81424 - 82014 | 21423.5 |
| cysteine--trna ligase | EJP69_00350 | Not Available | Positive | 82219 - 83595 | 50959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
