Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EJP69_03815 | Not Available | Negative | 841228 - 841695 | 17279.9 |
| ribosome silencing factor | EJP69_03820 | Not Available | Negative | 841692 - 842348 | 23163.9 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | EJP69_03825 | Not Available | Negative | 842348 - 842983 | 22796.3 |
| oxygen-dependent coproporphyrinogen oxidase | EJP69_03830 | Not Available | Negative | 842980 - 843897 | 34114.4 |
| phosphoribosylamine--glycine ligase | EJP69_03835 | Not Available | Negative | 843897 - 845207 | 46763.9 |
| yebc/pmpr family dna-binding transcriptional regulator | EJP69_03840 | Not Available | Negative | 845264 - 845989 | 26119.7 |
| methyltransferase domain-containing protein | EJP69_03845 | Not Available | Positive | 846118 - 846906 | 28249.2 |
| hypothetical protein | EJP69_03850 | Not Available | Positive | 846909 - 847946 | 37010.7 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EJP69_03855 | Not Available | Positive | 847989 - 848786 | 29645.1 |
| glycosyltransferase family 2 protein | EJP69_03860 | Not Available | Positive | 848753 - 849529 | 28892.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
