Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | EJP69_03665 | Not Available | Positive | 804947 - 806128 | 42118.1 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | EJP69_03670 | Not Available | Positive | 806128 - 807009 | 31662.6 |
| atp-binding cassette domain-containing protein | EJP69_03675 | Not Available | Positive | 807187 - 809166 | 72365.4 |
| hypothetical protein | EJP69_03680 | Not Available | Positive | 809204 - 809707 | 17744.9 |
| hypothetical protein | EJP69_03685 | Not Available | Negative | 809658 - 809891 | 8345.47 |
| helix-turn-helix domain-containing protein | EJP69_03690 | Not Available | Negative | 809899 - 810129 | 8623.71 |
| xre family transcriptional regulator | EJP69_03695 | Not Available | Positive | 810199 - 810915 | 26560.3 |
| efflux transporter outer membrane subunit | EJP69_03700 | Not Available | Positive | 811366 - 812976 | 56809.9 |
| efflux rnd transporter periplasmic adaptor subunit | EJP69_03705 | Not Available | Positive | 813017 - 814186 | 40601.0 |
| multidrug efflux protein | EJP69_03710 | Not Available | Positive | 814197 - 817286 | 110282.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
