Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | EJP69_28205 | Not Available | Negative | 6048124 - 6048828 | 25819.1 |
| sensor histidine kinase efflux regulator baes | EJP69_28210 | Not Available | Negative | 6048845 - 6050233 | 50659.1 |
| efflux rnd transporter periplasmic adaptor subunit | EJP69_28215 | Not Available | Positive | 6050372 - 6051622 | 42381.3 |
| efflux rnd transporter permease subunit | EJP69_28220 | Not Available | Positive | 6051636 - 6054782 | 112017.0 |
| efflux transporter outer membrane subunit | EJP69_28225 | Not Available | Positive | 6054788 - 6056257 | 51615.5 |
| hypothetical protein | EJP69_28230 | Not Available | Negative | 6056264 - 6056755 | 16521.5 |
| glsb/yeaq/ymge family stress response membrane protein | EJP69_28235 | Not Available | Negative | 6056788 - 6057030 | 8082.19 |
| 4-coumarate--coa ligase | EJP69_28240 | Not Available | Positive | 6057252 - 6058784 | 55057.7 |
| duf1646 domain-containing protein | EJP69_28245 | Not Available | Positive | 6058765 - 6059898 | 40052.2 |
| arac family transcriptional regulator | EJP69_28250 | Not Available | Positive | 6059951 - 6060646 | 25135.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
