Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | EJP69_27900 | Not Available | Negative | 5986371 - 5988236 | 67430.5 |
| type vi secretion system tip protein vgrg | EJP69_27905 | Not Available | Negative | 5988253 - 5991006 | 100580.0 |
| Trna-arg | Not Available | Not Available | Positive | 5991685 - 5991759 | Not Available |
| tetr family transcriptional regulator | EJP69_27915 | Not Available | Negative | 5991803 - 5992477 | 24676.9 |
| efflux rnd transporter periplasmic adaptor subunit | EJP69_27920 | Not Available | Positive | 5992656 - 5993942 | 44191.8 |
| efflux rnd transporter permease subunit | EJP69_27925 | Not Available | Positive | 5993961 - 5997128 | 112932.0 |
| efflux transporter outer membrane subunit | EJP69_27930 | Not Available | Positive | 5997121 - 5998554 | 51125.3 |
| cytochrome c5 family protein | EJP69_27935 | Not Available | Positive | 5998707 - 5999330 | 21032.1 |
| duf2946 family protein | EJP69_27940 | Not Available | Negative | 5999386 - 5999952 | 20713.4 |
| alpha/beta fold hydrolase | EJP69_27945 | Not Available | Negative | 6000056 - 6001054 | 35715.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
