Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | EJP69_27035 | Not Available | Positive | 5792248 - 5793222 | 32888.2 |
| nad/nadp octopine/nopaline dehydrogenase | EJP69_27040 | Not Available | Positive | 5793215 - 5794297 | 37521.7 |
| alkylhydroperoxidase | EJP69_27045 | Not Available | Negative | 5794289 - 5794891 | 22073.5 |
| cmd domain protein | EJP69_27050 | Not Available | Negative | 5794888 - 5795397 | 17723.4 |
| nad(p)/fad-dependent oxidoreductase | EJP69_27055 | Not Available | Negative | 5795412 - 5796872 | 52646.5 |
| alpha-glucosidase | EJP69_27060 | Not Available | Positive | 5797008 - 5798684 | 62167.1 |
| 1,4-alpha-glucan branching protein glgb | EJP69_27065 | Not Available | Positive | 5798690 - 5800867 | 81558.6 |
| glycogen debranching enzyme glgx | EJP69_27080 | Not Available | Positive | 5801544 - 5803652 | 76495.0 |
| glucose-1-phosphate adenylyltransferase | EJP69_27085 | Not Available | Positive | 5803744 - 5805060 | 48718.3 |
| glycogen synthase glga | EJP69_27090 | Not Available | Positive | 5805071 - 5806543 | 52883.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
