Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system membrane subunit tssm | EJP69_26360 | Not Available | Negative | 5645254 - 5648856 | 132778.0 |
| dotu family type vi secretion system protein | EJP69_26365 | Not Available | Negative | 5648853 - 5650217 | 48236.8 |
| type vi secretion system baseplate subunit tssk | EJP69_26370 | Not Available | Negative | 5650339 - 5651670 | 49304.5 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | EJP69_26375 | Not Available | Negative | 5651846 - 5652904 | 38642.6 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | EJP69_26380 | Not Available | Negative | 5652928 - 5653965 | 38223.9 |
| hybrid sensor histidine kinase/response regulator | EJP69_26385 | Not Available | Positive | 5654127 - 5656016 | 68210.5 |
| hypothetical protein | EJP69_26390 | Not Available | Negative | 5655925 - 5656218 | 10471.6 |
| abc transporter substrate-binding protein | EJP69_26395 | Not Available | Positive | 5656294 - 5657361 | 36842.2 |
| response regulator | EJP69_26400 | Not Available | Positive | 5657358 - 5659352 | 70288.9 |
| helix-turn-helix domain-containing protein | EJP69_26410 | Not Available | Negative | 5659582 - 5660547 | 35256.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
