Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | EJP69_26160 | Not Available | Positive | 5583879 - 5585219 | 48517.4 |
| dotu family type iv/vi secretion system protein | EJP69_26165 | Not Available | Positive | 5585224 - 5585985 | 29137.8 |
| type vi secretion protein icmf | EJP69_26170 | Not Available | Positive | 5586026 - 5590093 | 149242.0 |
| type vi secretion system protein tssa | EJP69_26175 | Not Available | Positive | 5590078 - 5591328 | 45721.2 |
| hypothetical protein | EJP69_26180 | Not Available | Positive | 5591364 - 5592887 | 55632.6 |
| twin-arginine translocation signal domain-containing protein | EJP69_26185 | Not Available | Negative | 5592934 - 5594040 | 40418.6 |
| tripartite tricarboxylate transporter substrate binding protein | EJP69_26190 | Not Available | Negative | 5594074 - 5595054 | 34342.0 |
| ribonuclease activity regulator rraa | EJP69_26195 | Not Available | Negative | 5595089 - 5595799 | 25712.8 |
| dihydroxy-acid dehydratase | EJP69_26200 | Not Available | Negative | 5595847 - 5597577 | 62985.0 |
| gntr family transcriptional regulator | EJP69_26205 | Not Available | Positive | 5597692 - 5598381 | 25379.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
