Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax gossypii |
| Strain | DSM 100435 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1023038 bp
Thymine Count
1028372 bp
Guanine Count
2128089 bp
Cytosine Count
2121555 bp
Genome Length
6302100 bp
Protein-coding Genes
5721 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | EJP69_26110 | Not Available | Positive | 5572653 - 5575391 | 98930.9 |
| type vi secretion system tip protein vgrg | EJP69_26115 | Not Available | Positive | 5575415 - 5577355 | 70393.6 |
| toxin-antitoxin system ywqk family antitoxin | EJP69_26120 | Not Available | Positive | 5577364 - 5578092 | 26231.3 |
| duf4280 domain-containing protein | EJP69_26125 | Not Available | Positive | 5578096 - 5578485 | 12884.9 |
| hypothetical protein | EJP69_26130 | Not Available | Positive | 5578551 - 5578790 | 8037.03 |
| amino acid abc transporter substrate-binding protein | EJP69_26135 | Not Available | Positive | 5578808 - 5579842 | 36583.4 |
| cation:dicarboxylase symporter family transporter | EJP69_26140 | Not Available | Positive | 5579867 - 5581141 | 44742.4 |
| aspartate/glutamate racemase family protein | EJP69_26145 | Not Available | Positive | 5581155 - 5581889 | 25211.2 |
| cation:dicarboxylase symporter family transporter | EJP69_26150 | Not Available | Positive | 5581877 - 5583346 | 50739.2 |
| hypothetical protein | EJP69_26155 | Not Available | Positive | 5583343 - 5583819 | 16998.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
